Prel. Schedule 110117
Genomic and Epigenomic Medicine 15 hp Spring 2011
17/1
13.00-14.00
14.00-16.00
Rudbeckssalen
Rudbeckssalen
Course introduction
Claes Wadelius/Lena Åslund
The structure of the Human genome Ulf Gyllensten
18/1
13.00-15.00
Rudbeckssalen
Genetic variation
19/1
10.00-12.00
Waldenström
Population genetics and the genetic structure of the genome:
HapMap, 1000 genomes
Åsa Johansson
20/1
9.00-12.00
13.00-14.00
Chipset B, BMC
Rudbeckssalen
Computer lab; HapMap
Rudbeck seminar;
Strimman- seminarie serie
Åsa Johansson
21/1
13.00-15.00
Rudbeckssalen
Genetics of gene expression
Åsa Johansson
Göran Andersson
Mattias Jakobsson
Lars Feuk
-------------24/1
10.00-12.00
13.00-15.00
Waldenström
Rudbeckssalen
Regulation of transcription
Population structure
25/1
13.00-15.00
15.00-17.00
Fåhreussalen
Waldenström
RNA processing
Göran Akusjärvi
The transcriptome; Expressed RNAs, non-coding, miRNAs,
piwis and biogenesis part I
Chandra Kanduri
26/1
10.00-12.00
13.00-14.00
Waldenström
Rudbeckssalen
Genetic antropology
Rudbeck seminar;
Svante Pääbo
Svante Pääbo
10.00-12.00
Fåhreussalen
13.00-14.00
Rudbeckssalen
10.00-12.00
Fåhreussalen
Finding genes for monogenic diseases
--------31/1 10.00-12.00
Chipset B, BMC
Informatics exercise
1st /2 10.00-12.00
Fåhreussalen
Finding genes for complex diseases Åsa Johansson
2/2
10.00-12.00
Fåhreussalen
GWAS, fine mapping
Åsa Johansson
3/2
10.00-12.00
13.00-14.00
Fåhreussalen
Rudbeckssalen
Genetic epidemiology
Rudbeck seminar;
Strimman
Patrik Magnusson
4/2
10.00-12.00
Fåhreussalen
Chromatin structure,
Claes Wadelius
Chemistry of histone and DNA modifications
GWAS
Seminar Group 1
GWAS
Seminar Group 2
27/1
28/1
13.00-14.00
14.00-15.00
_________
Mendel, C11:2
Mendel, C11:2
The transcriptome; Expressed RNAs, non-coding, miRNAs,
piwis and biogenesis part II
Chandra Kanduri
Rudbeck
seminar;
Strimman
Joakim Klar
Joakim Klar
7/2
10.00-12.00
13.00-15.00
Fåhreussalen
Fåhreussalen
8/2
13.00-16.00
Datorsal Chipset B, BMC
Web exercise ENCODE histone data
9/2
9.00-17.00
Lab B5 lab 3, BMC
Lab
10/2
9.00-12.00
13.00-14.00
Lab B5 lab 3, BMC
Rudbeckssalen
Lab
Rudbeck
Strimman
11/2 9.00-17.00
_________
Lab B5 lab 3, BMC
Lab
14/2
9.00-17.00
Lab B5 lab 3, BMC
Lab
15/2
9.00-17.00
Lab B5 lab 3, BMC
Lab
16/2
9.00-17.00
Lab B5 lab 3, BMC
Lab
17/2
10.00-12.00
13.00-14.00
Fåhreussalen
Rudbeckssalen
Structural epigenomics
Rudbeck
seminar;
Strimman
Rolf Ohlsson
18/2
10.00-12.00
Fåhreussalen
Epigenetics of non-coding RNAs
Chandra Kanduri
The Epigenomic landscape of histone modifications
Introduction to research project
seminar;
Claes Wadelius
21/2
10.00-12.00
Fåhreussalen
Strategies and applications in whole genome analysis projects Eva Berglund
22/2
10.00-12.00
13.00-15.00
Fåhreussalen
Darwin, C11:3
Comparative genomics and Animal models I
From association to gene Group I
Leif Andersson
23/2
10.00-12.00
13.00-15.00
Fåhreussalen
Mendel, C11:2
Comparative genomics and Animal models II
From association to gene Group II
Gerli Rosengren Pielberg
24/2
10.00-12.00
Fåhreussalen
13.00-14.00
Rudbeckssalen
Detection and application of allele specific gene expression
Ann-Christine Syvänen
Rudbeck
seminar;
Strimman
10.00-12.00
Fåhreussalen
Informatics and data analysis
DEADLINE; Selection of research article
Stefan Enroth
25/2
_________
28/2
10.00-12.00
Fåhreussalen
Pharmacogenomics I
Mia Wadelius
1/3
10.00-12.00
Fåhreussalen
Pharmacogenomics/epigenomics II
Magnus Ingelman-Sundberg
2/3
10.00-12.00
Fåhreussalen
Cancer genomics I
Tatjana Djureinovic
3/3
10.00-12.00
13.00-14.00
Fåhreussalen
Rudbeckssalen
Strimman
Cancer genomics II
Rudbeck
seminar;
Larry Mansouri
4/3
10.00-12.00
Fåhreussalen
Clinical genomics
Marie-Louise Bondesson
__________
7/3
Lecture
Selector
Site visit
Mats Nilsson
8/3
9.00-12.00
Fåhreussalen
Literature seminars
9/3
9.00-12.00
Fåhreussalen
Literature seminars
10/3
9.00-12.00
13.00-14.00
Fåhreussalen
Rudbeckssalen
Literature seminars
Rudbeck
seminar;
Strimman
11/3
9.00-12.00
Fåhreussalen
Literature seminars
DEADLINE; Submission of short communication
14/3
Preparation for exam
15/3
Preparation for exam
16/3
Preparation for exam
17/3
13.00-14.00
Preparation for exam
Rudbeckssalen
Rudbeck
Strimman
BOKA!!!!!!
Exam
18/3
seminar;
Teachers
Claes Wadelius
Ulf Gyllensten
Lars Feuk
Lena Åslund
Chandra Kanduri
Åsa Johansson
Mattias Jakobsson
Göran Andersson
Anders Virtanen
Eva Berglund?
Stefan Enroth?
Jocke Klaar
Partik Magnusson
Svante Pääbo
Leif Andersson
Kerstin Linblad-Toh
Tomas Ekström
Rolf Ohlsson
Mia Wadelius
Magnus Ingleman-Sundberg
Larry Mansouri
Tatjana Djureinovic [email protected] cancer genetics and genomics
Marie-Louise Bondesson
